This tool produces the alignment of two given sequences using BLAST
engine for local alignment.
Program
blastn
blastp
tblastn
blastx
tblastx
Sequence 1:
from:
to:
Enter sequence in FASTA format
or download from file
Sequence 2:
from:
to:
Enter sequence in FASTA format
or download from file
Parameters used in
BLASTN
program only:
Reward for a match:
Penalty for a mismatch:
Matrix
Not Applicable
Open gap
and extension gap
penalties
Gap x_dropoff
Expect value
Word size
Filter
Comments and suggetstions to:
blast-help@ncbi.nlm.nih.gov
